Category: References

  • Drawing Chlorophylls

    Drawing Chlorophylls

    Sample Drawing: 1. Chl samples are drawn on all rosette bottles tripped from ~200m to surface; sampling on a standard 20-bottle cast usually starts at #7 but refer to electronic sample log. For shallow stations, all the bottles may be sampled; noontime prodo casts may have extra bottles to sample; duplicate depths are usually skipped.  Refer to…

  • Drawing Nutrients

    Drawing Nutrients

    Retrieve an empty nutrient rack from the lab fridge if needed and record the color key with CESL electronic sample log. Wear latex or vinyl gloves; never touch the inside of the cap or tube since residue from your glove can contaminate the sample.  If unavoidable or you drop the lid – rinse several times…

  • Drawing Salts

    Drawing Salts

    The sample bottle number should ALWAYS match the rosette bottle number on full casts – check and re-check this during the sample drawing process.  If you ever have any doubt about the sample, dump it and start over. Shallow casts with fewer than 20 salt samples may be combined with a previous station. Check with…

  • General Guidelines

    Seawater Sampling All sample bottles are rinsed three times before the final fill. The sample bottle number always matches the rosette bottle number on full (20+ bottles closed) stations. On shallow stations, salinity samples may be drawn into an existing case. The watchleader will manage the sample log & bottle numbering in these situations & inform sample…

  • Primary Duties

    Tasks normally performed by watchstanders & volunteers after training: CTD prep – draining and rigging of CTD for deployment 20mins before station. Rosette bottles are drained, bottom lanyards unclipped; once drained, all valves are closed and rotated 90°, breathers are closed (lightly finger-tight), & spring-loaded bottles are rigged open so they can be closed at target…

  • Cruise Overview

    Cruise Overview

    The California Cooperative Oceanic Fisheries Investigations (CalCOFI) are a unique partnership of the California Department of Fish and Wildlife, the NOAA Fisheries Service and the Scripps Institution of Oceanography. The organization was formed in 1949 to study the ecological aspects of the collapse of the sardine populations off California. Today its focus has shifted to…

  • Line Handling

    Line Handling

    One of the first things taught to new cruise participants is line handling – lines are attached to the CTD-rosette to stabilize it during deployment and recovery.  Rough weather & a rolling ship can cause the 800lbs (empty; 363kg) -1500lbs (full; 680kg) CTD-rosette to swing dangerously when the winch lifts it. Taglines allow the CTD-rosette to…

  • ERDDAP Linux Setup

      ERDDAP Easier access to scientific data Brought to you by NOAA NMFS SWFSC ERD         Set Up Your Own ERDDAP   Why? | Initial Setup | Update | Need To Know | Don’t Need To Know | Programmer’s Guide | List of Changes | Credits | License | Contact And see…

  • Line.Sta Algorithms

    Line.Sta Algorithms

    Corrected Conversion Algorithm for CalCOFI Station Grid And Their Implementation in Several Computer Languages by Edward Weber & Thomas Moorem, NOAA Fisheries, 2013 CalCOFI Report v 54. Link to downloadable code (Java, Perl, Python & R) file presented in the CalCOFI Report vol 54, pages 102-106. Matlab scripts by Robert Thombley, SIO-CalCOFI with Sep2014 error…

  • Bottle Sampling Depths

    Bottle Sampling Depths

    Bottle Sampling Depths, based on downcast profiles The CalCOFI CTD-rosette is equipped with a Sea-Bird Electronic carousel water sampler (SBE 32), a computer-driven, electro-magnetically-released latch system. The 24 ten-liter plastic (PVC) bottles, equipped with epoxy-coated springs & Viton (non-toxic) O-rings, connect to 24 individual triggers by lanyards which keep the bottle ends open. During the…